This change does a few things:
* Renames `BeforeAnalyzeFileInterface` to `BeforeFileAnalysisInterface`.
* Adds a few more parameters to `BeforeFileAnalysisInterface`.
* Since the analysis was never called due to a bug, the above two
changes are safe to do.
* Fix the above-mentioned bug, and now adds the hooks to the config.
* Update the documentation about the File-related analysis plugin hooks.
* Add a test to ensure that this does not break again in the future.
Fixes: #3969
compared to AfterFunctionCallAnalysisInterface which gets only called
after a call to a function declared within the project, a plugin
implementing AfterEveryFunctionCallAnalysisInterface will get called for
every function call, including calls of PHP builtins.
On the other hand, this interface doesn't allow modification of the code
nor tweaking the return type, but it's still useful for accounting
purposes and for depreacting calls to PHP builtins
this fixes#2804
